Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891425.1_cds_XP_016446214.1_41093
CDS Infomation

[gene=LOC107771373] [db_xref=GeneID:107771373] [protein=E3 ubiquitin-protein ligase ATL42-like] [protein_id=XP_016446214.1] [location=complement(86406..87737)] [gbkey=CDS]
Sequence

ATGCAGATGTATTCTCTGGCTGCAGCATCTTGGATTCTCATGAATCAATCAAGTATGCTA
TTATTCTTAGCAGTCCTTTCGTTTGGATTATTTAGTGTTAAAGCTGAAGTCCCTCCATCA
GAAGATGTAGTTAGCAGTTTCCAGCCAAGTCTTGCTGTGGTTATTGGTGTCCTCTCCATC
ATGTTTTCACTAACTTTTCTTCTTCTCCTCTATGCCAAGTTCTGTCATAGGGCATCTTCT
TCTGTTCATAACAGCACCAATATTATGCATATTCAAGATGGACTTGTTCGATCAGTACCT
TCAGGTATCGATAAAACTGTGGTGGAATCACTCCCTTTTTTCAGGTTCTCTTTTATCAGA
GGGTCCAAACAAGGGCTTGAATGTGCTGTTTGCTTATCAAAATTTGAAGATATTGAAATC
CTTAGATTGCTGCCAAAGTGCAAACATGCCTTTCATATTGACTGTATTGATAAGTGGCTG
GAAAACCATTCAACCTGTCCACTTTGCAGGCATAAGGTCAGTGCTCAAGACCTTTCATTA
CTTACTTCTTCAGAGAGTTTGAGGTTCTTGTCTGAGCTAAGAGGGGAATCAAATTTGGAA
CTATATATACAAAGAGAGGAATCAAATTTGGAACTATATATTCAAAGAGAGGAATCAAAT
TTGGAACTATATATTCAAAGAGAGGAGAATGGATCCTCAAGATTTAGTATTGGAAGCAGC
TTTAAGAAATCCGAAAAGGGTAACAAGGAAGAAGAATTGCCAATACAAGAAAACAATATT
GATAATCAACAACAAACAGATTATCAGAATCAGAAAGCACTACACAGGCTCAATCATAGG
ATTATAGTCTCAGATGTTGTCTTCAAGAATCGATGGAGTAATGTGACTTCTTCAGACCTT
ATATTCTTGAATTCAGAAATGCTCAATAGCAACAGATTCTCATCAATGGACAGAATCACT
GAGCAATCCACGGCGAAAAGAGTGATAGAAGAAGAAGGTCAAAGAATGAATATCAAGGAT
GAAATGGAAAGGAAAAGATTGTTTGAGAGCAAGTTTAGCAAATTCCAGCAAAATGATTTA
TCTCAATTTCCAGAAGCCTCAGAATCAAGAACCAATTCATCAAAATCACTAAGTCAAAAT
GAGAAAAGATGCATGTCAGAAATTATAGTGCATCCAAGATTCAACAGCAACAACATTGGT
AATAGAAAGCTTTCGGAACGGAGAAGGAAGCTTTGGCTTCCAATTGCAAGGAGAACAGTC
AAGTGGTTTGCTAATAGGGAAAGAAAGTCCTCCTCACATACAGCAAACAGAAGACAAACA
CTAAATTTATAG

Peptide Sequence

PEP ID

XP_016446214.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Nicotiana tabacum]
Sequence

MQMYSLAAASWILMNQSSMLLFLAVLSFGLFSVKAEVPPSEDVVSSFQPSLAVVIGVLSI
MFSLTFLLLLYAKFCHRASSSVHNSTNIMHIQDGLVRSVPSGIDKTVVESLPFFRFSFIR
GSKQGLECAVCLSKFEDIEILRLLPKCKHAFHIDCIDKWLENHSTCPLCRHKVSAQDLSL
LTSSESLRFLSELRGESNLELYIQREESNLELYIQREESNLELYIQREENGSSRFSIGSS
FKKSEKGNKEEELPIQENNIDNQQQTDYQNQKALHRLNHRIIVSDVVFKNRWSNVTSSDL
IFLNSEMLNSNRFSSMDRITEQSTAKRVIEEEGQRMNIKDEMERKRLFESKFSKFQQNDL
SQFPEASESRTNSSKSLSQNEKRCMSEIIVHPRFNSNNIGNRKLSERRRKLWLPIARRTV
KWFANRERKSSSHTANRRQTLNL

Transcript Sequence

Gene sequence data has not been registered.